A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 3-Aug-2022 number of released structures: 12227
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NDB ID: ADF073  PDB ID: 257D 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12A_DC2:DG11_B0.096-0.2540.1356.596-13.242-2.799
13A_DC3:DG10_B0.851-0.1330.4066.129-20.6954.544
16A_DC6:DG7_B0.619-0.307-0.0783.6810.982-4.863
11A_DG1:DC12_B-0.6190.077-0.112-3.7411.4023.415
14A_DG4:DC9_B-0.1410.048-0.366-7.434-10.6126.22
15A_DG5:DC8_B-0.522-0.034-0.128-10.474-12.5084.743

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.