A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 3-Aug-2022 number of released structures: 12227
Search for released structures

NDB ID: ADF073  PDB ID: 257D 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
12AA_DC2DC3:DG10DG11_BB0.398-1.7223.352-0.8178.7732.511-4.344-0.8152.79515.3171.42733.651
13AA_DC3DG4:DC9DG10_BB-0.017-1.7193.5123.6916.85824.897-6.4520.7231.95834.33-7.51630.215
11AA_DG1DC2:DG11DC12_BB-0.654-1.483.147-1.7015.78735.416-3.1720.8352.9049.4292.77135.91
14AA_DG4DG5:DC8DC9_BB0.01-1.6433.39-0.66911.76725.663-5.93-0.1662.41624.8881.41628.199
15AA_DG5DC6:DG7DC8_BB0.044-1.2192.985-0.7672.51737.279-2.202-0.1592.8983.9321.19837.369

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.