A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Sep-2022 number of released structures: 12282
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NDB ID: 7EI5  PDB ID: 7EI5 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12A_A2:DT34_A-0.175-0.4330.294-2.841-8.037-0.852
15A_A5:DT31_A0.164-0.3550.4195.101-12.117-0.891
113A_A15:DT22_A0.245-0.584-0.321-3.068-14.0650.638
11A_C1:DG35_A-0.44-0.1470.652-11.409-8.207-3.947
14A_C4:DG32_A-0.312-0.3870.443-1.551-9.5431.274
18A_C8:DG28_A-0.05-0.2970.163-5.436-6.975-1.08
112A_C14:DG23_A-0.379-0.392-0.0344.069-14.613-7.035
13A_G3:DC33_A-0.397-0.3650.221-0.646-14.4990.567
16A_G6:DC30_A-0.136-0.3630.369.728-6.75-0.279
17A_G7:DC29_A-0.106-0.1890.1452.409-16.8527.716
110A_G12:DT25_A-2.041-0.8750.03-6.124-13.673-7.934
111A_G13:DC24_A-0.191-0.0840.019-1.429-7.1892.264
115A_G17:A20_A6.91-5.1020.80715.5833.038-12.628
19A_U9:DA26_A4.196-2.825-0.508-21.9931.761-82.848
114A_U16:DG21_A2.305-0.615-0.1741.1882.7353.69

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.