A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Sep-2022 number of released structures: 12282
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NDB ID: 7KTH  PDB ID: 7KTH 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
16TT_DA7DC8:DG2DT3_PP-0.342-1.3143.2742.2013.9235.792-2.6640.8583.0926.347-3.56436.064
11TT_DC1DG2:DC3DG4_DD-0.4770.6343.2432.1785.98332.9760.1121.1843.26710.419-3.79233.568
14TT_DC5DT6:DA48OG5_PP0.304-0.1592.849-1.2344.37916.753-2.865-1.6682.68914.6814.13717.356
17TT_DC8DG9:DC1DG2_PP-0.769-1.3153.572-3.5037.28535.581-3.1770.7123.30611.7355.64336.459
12TT_DG2DG3:DC2DC3_DD0.42-0.1843.373-2.1663.71835.226-0.86-1.0143.3076.1163.56335.48
13TT_DG3DC4:DG1DC2_DD0.3530.0843.0434.1922.56626.822-0.4240.2363.0565.474-8.94127.26
15TT_DT6DA7:DT3DA4_PP0.157-1.1693.099-3.8133.15828.991-2.93-1.0672.9146.2517.54629.402

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.