A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Sep-2022 number of released structures: 12282
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NDB ID: 7MZ4  PDB ID: 7MZ4 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14T_DA4:DT2_D0.015-0.1220.4888.046-9.703-1.601
110T_DA11:DT6_P0.140.080.56510.777-16.6833.673
113T_DA14:DT3_P0.2190.0110.232-2.705-5.314-2.335
11T_DC1:DG5_D-0.004-0.2180.38-3.497-17.694-0.696
12T_DC2:DG4_D0.311-0.333-0.073-1.36-2.4240.274
15T_DC5:DG1_D0.168-0.043-0.24516.458-4.032-0.257
17T_DC8:DG9_P0.126-0.317-0.4334.187-7.742-1.654
19T_DC10:DG7_P0.364-0.0350.4723.976-9.4310.198
112T_DC13:DG4_P0.377-0.1660.1182.361-16.00.081
115T_DC16:DG1_P0.214-0.1330.24910.005-15.649-0.508
13T_DG3:DC3_D-0.271-0.0110.2141.734-9.918-1.832
18T_DG9:DC8_P-0.453-0.0460.1894.6-3.4612.477
114T_DG15:DC2_P-0.28-0.0930.44215.793-5.5893.992
16T_DT7:DA10_P-0.263-0.162-0.431-10.223-3.6424.027
111T_DT12:DA5_P-0.096-0.115-0.00513.761-13.7894.683

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.